de.mdc-berlin / cellsketch-plot / 0.1.0

CellSketch: Plot analysis results

Plots generated by this solution.
This solution plots exemplary spatial analysis results of a CellSketch project.
Citation Müller, D. Schmidt, C. S. Xu, S. Pang, J. V. D’Costa, S. Kretschmar, C. Münster, T. Kurth, F. Jug, M. Weigert, H. F. Hess, M. Solimena; 3D FIB-SEM reconstruction of microtubule–organelle interaction in whole primary mouse β cells. J Cell Biol 1 February 2021; 220 (2): e202010039.
Solution written by
Deborah Schmidt


The CellSketch project to be opened (.n5). (default value: PARAMETER_VALUE)
Output directory where the plots will be saved to. (default value: PARAMETER_VALUE)

Usage instructions

Please follow this link for details on how to install and run this solution.